EnhancerDB
  1. Home
  2. SNP
  3. rs564052353[chr19:3387437]
Enhancers that have rs564052353[chr19:3387437]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs564052353[chr19:3387437]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3386265 3389100 TCF7L2 GTRD no Colon (HCT116) 21839142
chr19 3386265 3389100 TCF7L2 GTRD no Colon (HCT116) 108366435
chr19 3387135 3388928 ZNF143 GTRD no Epithelial (MCF-7) 21839143
chr19 3387135 3388928 ZNF143 GTRD no Epithelial (MCF-7) 108366436
chr19 3387338 3388621 TCF7L2 GTRD no Colon (HCT116) 21839144
chr19 3387338 3388621 TCF7L2 GTRD no Colon (HCT116) 108366437
chr19 3387348 3388375 ZNF143 GTRD no Epithelial (MCF-7) 21839145
chr19 3387348 3388375 ZNF143 GTRD no Epithelial (MCF-7) 108366438
chr19 3387358 3388469 TCF7L2 GTRD no Colon (HCT116) 21839146
chr19 3387358 3388469 TCF7L2 GTRD no Colon (HCT116) 108366439
chr19 3387406 3388317 ZNF143 GTRD no Epithelial (MCF-7) 21839147
chr19 3387406 3388317 ZNF143 GTRD no Epithelial (MCF-7) 108366440
chr19 3387418 3388580 ZNF274 GTRD no Cervix (HeLa-S3) 21839148
chr19 3387418 3388580 ZNF274 GTRD no Cervix (HeLa-S3) 108366441
chr19 3387420 3388361 ZNF143 GTRD no Epithelial (MCF-7) 21839149
chr19 3387420 3388361 ZNF143 GTRD no Epithelial (MCF-7) 108366442
chr19 3387426 3387443 ESR1 JASPAR yes 112126736
chr19 3387426 3387444 ESR2 JASPAR yes 112126737
chr19 3387430 3387444 TLX1 JASPAR yes 112126738
Genes associated with rs564052353[chr19:3387437], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More