EnhancerDB
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  3. rs564195860[chr2:236427842]
Enhancers that have rs564195860[chr2:236427842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs564195860[chr2:236427842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236427842 236427858 RFX2 JASPAR yes 81977372
chr2 236427842 236427858 RFX3 JASPAR yes 81977373
chr2 236427842 236427858 RFX4 JASPAR yes 81977374
Genes associated with rs564195860[chr2:236427842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More