EnhancerDB
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  3. rs564203405[chr1:55335309]
Enhancers that have rs564203405[chr1:55335309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55319988 55335735 enh370
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs564203405[chr1:55335309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55335301 55335312 FOSL2 JASPAR yes 29002963
chr1 55335303 55335316 SMAD2 JASPAR yes 29002964
chr1 55335306 55335316 TBR1 JASPAR yes 29002965
chr1 55335307 55335317 TBX21 JASPAR yes 29002966
chr1 55335308 55335316 MGA JASPAR yes 29002967
chr1 55335308 55335316 TBX15 JASPAR yes 29002968
chr1 55335308 55335316 TBX1 JASPAR yes 29002969
chr1 55335308 55335316 TBX4 JASPAR yes 29002970
chr1 55335308 55335316 TBX5 JASPAR yes 29002971
chr1 55335308 55335317 ZEB1 JASPAR yes 29002972
chr1 55335308 55335320 PKNOX1 JASPAR yes 29002973
chr1 55335308 55335320 TGIF1 JASPAR yes 29002974
chr1 55335308 55335321 ZBTB18 JASPAR yes 29002975
chr1 55335309 55335319 FIGLA JASPAR yes 29002976
chr1 55335309 55335319 ID4 JASPAR yes 29002977
chr1 55335309 55335319 TCF3 JASPAR yes 29002978
chr1 55335309 55335319 TCF4 JASPAR yes 29002979
Genes associated with rs564203405[chr1:55335309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More