EnhancerDB
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  3. rs564236390[chr1:23920913]
Enhancers that have rs564236390[chr1:23920913]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs564236390[chr1:23920913]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23920910 23920924 RORA JASPAR yes 27445026
chr1 23920912 23920927 MEF2A JASPAR yes 27445027
chr1 23920913 23920928 MEF2C JASPAR yes 27445028
Genes associated with rs564236390[chr1:23920913], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More