EnhancerDB
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  3. rs564258589[chr17:38509076]
Enhancers that have rs564258589[chr17:38509076]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38486105 38510075 enh60669
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Lung (PC-9) Uterus Blood (T-cell) Stomach
Transcript factors that have rs564258589[chr17:38509076]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38507281 38510119 ZBTB33 GTRD no Lung (A549) 108254747
chr17 38508331 38510508 TCF7L2 GTRD no Colon (HCT116) 21753780
chr17 38508331 38510508 TCF7L2 GTRD no Colon (HCT116) 108254748
chr17 38508450 38510478 TCF7L2 GTRD no Colon (HCT116) 21753781
chr17 38508450 38510478 TCF7L2 GTRD no Colon (HCT116) 108254749
chr17 38508534 38510237 TCF7L2 GTRD no Colon (HCT116) 21753782
chr17 38508534 38510237 TCF7L2 GTRD no Colon (HCT116) 108254750
chr17 38508600 38509879 ZBTB33 GTRD no Lung (A549) 108254751
chr17 38508613 38509843 ZBTB33 GTRD no Lung (A549) 108254752
chr17 38508693 38510226 ZNF143 GTRD no Epithelial (MCF-7) 108254753
chr17 38508718 38512236 ZBTB33 GTRD no Brain (SK-N-SH) 21753783
chr17 38508718 38512236 ZBTB33 GTRD no Brain (SK-N-SH) 108254754
chr17 38508790 38510191 ZBTB33 GTRD no Lung (A549) 108254755
chr17 38508810 38510071 ZBTB33 GTRD no Lung (A549) 108254756
chr17 38508870 38509931 ZBTB33 GTRD no Lung (A549) 108254757
chr17 38508878 38510037 TCF7L2 GTRD no Colon (HCT116) 21753784
chr17 38508878 38510037 TCF7L2 GTRD no Colon (HCT116) 108254758
chr17 38508897 38510291 ZNF143 GTRD no Epithelial (MCF-7) 108254759
chr17 38508937 38510160 ZBTB33 GTRD no Lung (A549) 108254760
chr17 38508946 38509880 ZBTB33 GTRD no Lung (A549) 108254761
chr17 38508947 38510656 TCF7L2 GTRD no Colon (HCT116) 21753785
chr17 38508947 38510656 TCF7L2 GTRD no Colon (HCT116) 108254762
chr17 38508970 38510144 ZNF274 GTRD no Bone Marrow (K562) 108254763
chr17 38508972 38509630 TCF7L2 GTRD no Colon (HCT116) 21753786
chr17 38508972 38509630 TCF7L2 GTRD no Colon (HCT116) 108254764
chr17 38508979 38512968 ZBTB33 GTRD no Brain (SK-N-SH) 21753787
chr17 38508979 38512968 ZBTB33 GTRD no Brain (SK-N-SH) 108254765
chr17 38508990 38509986 ZNF274 GTRD no Blood (GM12878) 21753788
chr17 38508990 38509986 ZNF274 GTRD no Blood (GM12878) 108254766
chr17 38508998 38511328 ZNF274 GTRD no Liver (HepG2) 21753789
chr17 38508998 38511328 ZNF274 GTRD no Liver (HepG2) 108254767
chr17 38508999 38509691 TCF7L2 GTRD no Colon (HCT116) 21753790
chr17 38508999 38509691 TCF7L2 GTRD no Colon (HCT116) 108254768
chr17 38509000 38509564 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21753791
chr17 38509000 38509564 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108254769
chr17 38509019 38509559 EP300 UCSC Txn Factor no Conserved 108254770
chr17 38509019 38509559 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108254771
chr17 38509024 38509904 ZNF274 GTRD no Bone Marrow (K562) 108254772
chr17 38509036 38509883 ZNF274 GTRD no Liver (HepG2) 21753792
chr17 38509036 38509883 ZNF274 GTRD no Liver (HepG2) 108254773
chr17 38509036 38510013 ZNF274 GTRD no Bone Marrow (K562) 108254774
chr17 38509040 38509823 ZNF274 GTRD no Bone Marrow (K562) 108254775
chr17 38509041 38511254 ZNF274 GTRD no Liver (HepG2) 21753793
chr17 38509041 38511254 ZNF274 GTRD no Liver (HepG2) 108254776
chr17 38509045 38509830 ZBTB33 GTRD no Lung (A549) 108254777
chr17 38509055 38509835 ZNF274 GTRD no Bone Marrow (K562) 108254778
chr17 38509056 38509897 ZNF274 GTRD no Blood (GM12878) 21753794
chr17 38509056 38509897 ZNF274 GTRD no Blood (GM12878) 108254779
chr17 38509058 38510002 ZNF274 GTRD no Liver (HepG2) 21753795
chr17 38509058 38510002 ZNF274 GTRD no Liver (HepG2) 108254780
chr17 38509063 38509792 ZNF143 GTRD no Epithelial (MCF-7) 108254781
chr17 38509065 38509860 ZNF274 GTRD no Liver (HepG2) 21753796
chr17 38509065 38509860 ZNF274 GTRD no Liver (HepG2) 108254782
chr17 38509067 38511145 ZNF274 GTRD no Bone Marrow (K562) 108254783
chr17 38509069 38509090 LUN1 TRANSFAC yes 54209408
chr17 38509069 38510925 ZNF274 GTRD no Bone Marrow (K562) 108254784
chr17 38509073 38509896 ZNF274 GTRD no Liver (HepG2) 21753797
chr17 38509073 38509896 ZNF274 GTRD no Liver (HepG2) 108254785
chr17 38509073 38510163 ZNF274 GTRD no Blood (GM12878) 21753798
chr17 38509073 38510163 ZNF274 GTRD no Blood (GM12878) 108254786
chr17 38509074 38509821 ZNF274 GTRD no Liver (HepG2) 21753799
chr17 38509074 38509821 ZNF274 GTRD no Liver (HepG2) 108254787
chr17 38509074 38509887 ZBTB33 GTRD no Lung (A549) 108254788
chr17 38509076 38509903 ZNF274 GTRD no Liver (HepG2) 21753800
chr17 38509076 38509903 ZNF274 GTRD no Liver (HepG2) 108254789
Genes associated with rs564258589[chr17:38509076], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More