EnhancerDB
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  3. rs564266598[chr18:55898469]
Enhancers that have rs564266598[chr18:55898469]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55895930 55912515 enh17738
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Heart
Transcript factors that have rs564266598[chr18:55898469]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55898466 55898481 FOXP1 JASPAR yes 110929981
chr18 55898467 55898482 FOXP1 JASPAR yes 110929982
chr18 55898468 55898483 FOXP1 JASPAR yes 110929983
chr18 55898468 55898489 IRF1 JASPAR yes 110929984
chr18 55898469 55898484 FOXP1 JASPAR yes 110929985
chr18 55898469 55898490 IRF1 JASPAR yes 110929986
Genes associated with rs564266598[chr18:55898469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More