EnhancerDB
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  3. rs564271601[chr19:4976216]
Enhancers that have rs564271601[chr19:4976216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564271601[chr19:4976216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4975153 4977554 TEF1 GTRD no Bone (Osteoblast) 21842893
chr19 4975153 4977554 TEF1 GTRD no Bone (Osteoblast) 108374027
chr19 4975924 4977363 AR GTRD no Prostate (PC-3) 21842894
chr19 4975924 4977363 AR GTRD no Prostate (PC-3) 108374028
chr19 4975979 4977015 ZNF143 GTRD no Epithelial (MCF-7) 21842895
chr19 4975979 4977015 ZNF143 GTRD no Epithelial (MCF-7) 108374029
chr19 4975995 4976964 ZNF143 GTRD no Epithelial (MCF-7) 21842896
chr19 4975995 4976964 ZNF143 GTRD no Epithelial (MCF-7) 108374030
chr19 4976075 4977061 ZNF143 GTRD no Epithelial (MCF-7) 21842897
chr19 4976075 4977061 ZNF143 GTRD no Epithelial (MCF-7) 108374031
chr19 4976088 4977032 ZNF143 GTRD no Epithelial (MCF-7) 21842898
chr19 4976088 4977032 ZNF143 GTRD no Epithelial (MCF-7) 108374032
chr19 4976108 4976949 ZNF143 GTRD no Epithelial (MCF-7) 21842899
chr19 4976108 4976949 ZNF143 GTRD no Epithelial (MCF-7) 108374033
chr19 4976130 4976993 ZNF274 GTRD no Liver (HepG2) 21842900
chr19 4976130 4976993 ZNF274 GTRD no Liver (HepG2) 108374034
chr19 4976150 4976656 ZNF143 GTRD no Epithelial (MCF-7) 21842901
chr19 4976150 4976656 ZNF143 GTRD no Epithelial (MCF-7) 108374035
chr19 4976153 4977201 ZBTB33 GTRD no Lung (A549) 108374036
chr19 4976156 4976907 ZNF143 GTRD no Epithelial (MCF-7) 21842902
chr19 4976156 4976907 ZNF143 GTRD no Epithelial (MCF-7) 108374037
chr19 4976168 4976908 ZNF274 GTRD no Bone Marrow (K562) 108374038
chr19 4976169 4976857 ZBTB33 GTRD no Lung (A549) 108374039
chr19 4976171 4976986 ZNF274 GTRD no Blood (GM12878) 108374040
chr19 4976177 4976944 ZNF143 GTRD no Epithelial (MCF-7) 21842903
chr19 4976177 4976944 ZNF143 GTRD no Epithelial (MCF-7) 108374041
chr19 4976191 4976970 ZBTB33 GTRD no Lung (A549) 108374042
chr19 4976191 4977169 ZNF274 GTRD no Cervix (HeLa-S3) 21842904
chr19 4976191 4977169 ZNF274 GTRD no Cervix (HeLa-S3) 108374043
chr19 4976194 4976960 ZNF274 GTRD no Blood (GM12878) 108374044
chr19 4976195 4976868 ZNF274 GTRD no Liver (HepG2) 21842905
chr19 4976195 4976868 ZNF274 GTRD no Liver (HepG2) 108374045
chr19 4976197 4976856 ZNF143 GTRD no Epithelial (MCF-7) 21842906
chr19 4976197 4976856 ZNF143 GTRD no Epithelial (MCF-7) 108374046
chr19 4976209 4976223 ATF7 JASPAR yes 112201221
chr19 4976209 4976223 BATF3 JASPAR yes 112201222
chr19 4976209 4976749 ZNF274 GTRD no Liver (HepG2) 21842907
chr19 4976209 4976749 ZNF274 GTRD no Liver (HepG2) 108374047
chr19 4976209 4976865 ZBTB33 GTRD no Lung (A549) 108374048
chr19 4976209 4976989 ZBTB33 GTRD no Lung (A549) 108374049
chr19 4976211 4976221 MLX JASPAR yes 112201223
chr19 4976211 4976221 SREBF1 JASPAR yes 112201224
chr19 4976211 4976221 SREBF2 JASPAR yes 112201225
chr19 4976211 4976922 ZNF274 GTRD no Liver (HepG2) 21842908
chr19 4976211 4976922 ZNF274 GTRD no Liver (HepG2) 108374050
chr19 4976214 4976219 ATF1 TRANSFAC yes 112201226
chr19 4976214 4977195 ZNF274 GTRD no Bone Marrow (K562) 108374051
Genes associated with rs564271601[chr19:4976216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More