EnhancerDB
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  3. rs564285702[chr17:27486492]
Enhancers that have rs564285702[chr17:27486492]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27463605 27492255 enh4319
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs564285702[chr17:27486492]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27486471 27486492 IRF1 JASPAR yes 53719119
chr17 27486476 27486497 IRF1 JASPAR yes 53719122
chr17 27486478 27486498 RREB1 JASPAR yes 53719123
chr17 27486481 27486493 IRF1 JASPAR yes 53719124
chr17 27486481 27486496 FOXP1 JASPAR yes 53719125
chr17 27486483 27486503 RREB1 JASPAR yes 53719126
chr17 27486485 27486500 FOXP1 JASPAR yes 53719127
chr17 27486486 27486497 FOXA1 JASPAR yes 53719128
chr17 27486486 27486501 FOXA1 JASPAR yes 53719129
chr17 27486487 27486499 FOXC2 JASPAR yes 53719130
chr17 27486488 27486500 FOXI1 JASPAR yes 53719131
chr17 27486488 27486508 RREB1 JASPAR yes 53719132
chr17 27486492 27486507 FOXP1 JASPAR yes 53719133
Genes associated with rs564285702[chr17:27486492], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More