EnhancerDB
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  3. rs564300456[chr1:3231689]
Enhancers that have rs564300456[chr1:3231689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564300456[chr1:3231689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3230572 3231882 TCF7L2 GTRD no Colon (HCT116) 107801847
chr1 3231680 3231701 IRF1 JASPAR yes 26278669
chr1 3231681 3231702 ZNF263 JASPAR yes 26278670
chr1 3231682 3231697 PRDM1 JASPAR yes 26278671
chr1 3231684 3231705 ZNF263 JASPAR yes 26278672
chr1 3231687 3231708 ZNF263 JASPAR yes 26278673
chr1 3231688 3231703 PRDM1 JASPAR yes 26278674
chr1 3231688 3231709 ZNF263 JASPAR yes 26278675
Genes associated with rs564300456[chr1:3231689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More