EnhancerDB
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  3. rs564300648[chr12:53366990]
Enhancers that have rs564300648[chr12:53366990]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs564300648[chr12:53366990]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53364919 53367051 ZNF274 GTRD no Bone Marrow (K562) 21548374
chr12 53364919 53367051 ZNF274 GTRD no Bone Marrow (K562) 108035203
chr12 53364998 53367341 TCF7L2 GTRD no Colon (HCT116) 21548380
chr12 53364998 53367341 TCF7L2 GTRD no Colon (HCT116) 108035209
chr12 53365033 53367381 ZNF274 GTRD no Bone Marrow (K562) 21548382
chr12 53365033 53367381 ZNF274 GTRD no Bone Marrow (K562) 108035211
chr12 53365768 53367286 TCF7L2 GTRD no Colon (HCT116) 21548473
chr12 53365768 53367286 TCF7L2 GTRD no Colon (HCT116) 108035296
chr12 53365824 53367101 ZNF274 GTRD no Cervix (HeLa-S3) 21548485
chr12 53365824 53367101 ZNF274 GTRD no Cervix (HeLa-S3) 108035312
chr12 53366194 53367075 TCF7L2 GTRD no Colon (HCT116) 21548524
chr12 53366338 53367994 TCF7L2 GTRD no Colon (HCT116) 21548528
chr12 53366539 53367131 TCF7L2 GTRD no Colon (HCT116) 21548534
chr12 53366559 53367090 ZNF274 GTRD no Cervix (HeLa-S3) 21548535
Genes associated with rs564300648[chr12:53366990], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More