EnhancerDB
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  3. rs564316007[chr17:76932419]
Enhancers that have rs564316007[chr17:76932419]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76924065 76939144 enh17419
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564316007[chr17:76932419]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76931463 76933661 TCF7L2 GTRD no Colon (HCT116) 21795410
chr17 76931854 76932514 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795413
chr17 76932051 76932451 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21795414
chr17 76932070 76932426 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21795415
chr17 76932142 76932438 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21795419
chr17 76932171 76933233 TCF7L2 GTRD no Colon (HCT116) 21795421
chr17 76932182 76932452 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21795422
chr17 76932268 76933584 TCF7L2 GTRD no Colon (HCT116) 21795424
chr17 76932275 76933649 TCF7L2 GTRD no Colon (HCT116) 21795425
chr17 76932317 76933286 TCF7L2 GTRD no Colon (HCT116) 21795426
chr17 76932368 76932987 TCF7L2 GTRD no Colon (HCT116) 21795427
chr17 76932398 76932939 TCF7L2 GTRD no Colon (HCT116) 21795428
chr17 76932408 76932423 TFAP2C JASPAR yes 56190501
chr17 76932419 76932423 H4TF2 TRANSFAC yes 56190502
Genes associated with rs564316007[chr17:76932419], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More