EnhancerDB
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  3. rs564342149[chr1:202054818]
Enhancers that have rs564342149[chr1:202054818]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs564342149[chr1:202054818]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 21366717
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857734
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857735
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857736
chr1 202054363 202054867 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366723
chr1 202054363 202054867 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857742
chr1 202054484 202054874 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366728
chr1 202054606 202059238 ZNF143 GTRD no Epithelial (MCF-7) 21366731
chr1 202054606 202059238 ZNF143 GTRD no Epithelial (MCF-7) 107857746
chr1 202054606 202059238 ZNF143 GTRD no Epithelial (MCF-7) 107857747
chr1 202054618 202055379 ZNF143 GTRD no Epithelial (MCF-7) 21366732
chr1 202054618 202055379 ZNF143 GTRD no Epithelial (MCF-7) 107857748
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 21366733
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 107857749
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 107857750
chr1 202054729 202055048 TCF7L2 GTRD no Colon (HCT116) 21366734
chr1 202054753 202055117 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366735
chr1 202054753 202055117 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857751
chr1 202054753 202055129 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366736
chr1 202054753 202055129 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857752
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 21366737
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 107857753
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 107857754
chr1 202054814 202054819 SP1 TRANSFAC yes 34551593
Genes associated with rs564342149[chr1:202054818], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More