EnhancerDB
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  3. rs564541520[chr18:51918814]
Enhancers that have rs564541520[chr18:51918814]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51910465 51921195 enh4845
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs564541520[chr18:51918814]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51918799 51918814 HNF1A JASPAR yes 110715314
chr18 51918804 51918815 PHOX2A JASPAR yes 110715316
chr18 51918804 51918815 PROP1 JASPAR yes 110715317
chr18 51918807 51918817 MNX1 JASPAR yes 110715318
chr18 51918808 51918816 BARX1 JASPAR yes 110715319
Genes associated with rs564541520[chr18:51918814], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More