EnhancerDB
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  3. rs564608590[chr19:12900965]
Enhancers that have rs564608590[chr19:12900965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 12880762 12907555 enh5013
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell)
chr19 12899457 12901460 vista28658
VISTA
Transcript factors that have rs564608590[chr19:12900965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 12899245 12906365 POLR2A UCSC Txn Factor no Conserved 108386458
chr19 12899245 12906365 POLR2A UCSC Txn Factor no Conserved 108386459
chr19 12900641 12900965 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108386610
chr19 12900651 12901171 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108386611
chr19 12900656 12901056 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108386614
chr19 12900657 12901061 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849909
chr19 12900657 12901061 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386615
chr19 12900659 12900995 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386616
chr19 12900669 12901059 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108386618
chr19 12900669 12901289 MAZ UCSC Txn Factor no Conserved 108386619
chr19 12900673 12901049 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108386621
chr19 12900680 12901050 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108386622
chr19 12900681 12901117 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386623
chr19 12900687 12901031 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108386624
chr19 12900688 12901124 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386625
chr19 12900691 12901021 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849910
chr19 12900691 12901021 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386626
chr19 12900694 12901038 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386627
chr19 12900702 12901198 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386628
chr19 12900702 12901217 E2F1 UCSC Txn Factor no Conserved 108386629
chr19 12900702 12901217 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108386630
chr19 12900708 12900998 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386631
chr19 12900712 12901168 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386634
chr19 12900712 12901248 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386635
chr19 12900715 12901219 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849912
chr19 12900715 12901219 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386636
chr19 12900724 12901100 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108386637
chr19 12900725 12901065 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108386638
chr19 12900727 12901102 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849913
chr19 12900727 12901102 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386639
chr19 12900728 12901128 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386640
chr19 12900730 12901217 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108386641
chr19 12900736 12901112 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386642
chr19 12900739 12901015 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108386643
chr19 12900739 12901119 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386644
chr19 12900743 12900983 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386645
chr19 12900745 12900981 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386646
chr19 12900749 12901473 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386647
chr19 12900754 12901090 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386648
chr19 12900762 12901238 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849914
chr19 12900762 12901238 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386649
chr19 12900764 12901068 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849915
chr19 12900764 12901068 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386650
chr19 12900764 12901094 BHLHE40 UCSC Txn Factor no Conserved 108386651
chr19 12900764 12901094 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386652
chr19 12900766 12901206 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386653
chr19 12900767 12901107 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386654
chr19 12900770 12901130 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386655
chr19 12900771 12901043 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108386656
chr19 12900771 12901360 EP300 UCSC Txn Factor no Conserved 108386657
chr19 12900774 12901218 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108386658
chr19 12900779 12901183 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386659
chr19 12900781 12901191 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386660
chr19 12900782 12901046 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386661
chr19 12900790 12901026 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386662
chr19 12900790 12901100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386663
chr19 12900792 12901048 JUND UCSC Txn Factor no Conserved 108386664
chr19 12900792 12901308 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386665
chr19 12900795 12901015 CHD1 UCSC Txn Factor no Conserved 108386666
chr19 12900797 12901421 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386667
chr19 12900800 12901014 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386668
chr19 12900811 12901078 RUNX3 UCSC Txn Factor no Conserved 108386669
chr19 12900811 12901078 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386670
chr19 12900817 12901307 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386671
chr19 12900820 12901360 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386672
chr19 12900821 12900997 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386673
chr19 12900825 12901289 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849916
chr19 12900825 12901289 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386674
chr19 12900827 12901011 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386675
chr19 12900836 12900970 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386676
chr19 12900837 12901002 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386677
chr19 12900838 12901160 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386678
chr19 12900841 12901381 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386679
chr19 12900852 12901113 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108386681
chr19 12900854 12901143 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386682
chr19 12900880 12901156 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386684
chr19 12900880 12901442 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849917
chr19 12900880 12901442 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386685
chr19 12900881 12901457 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386686
chr19 12900917 12901287 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386687
chr19 12900930 12901326 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849918
chr19 12900930 12901326 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386688
chr19 12900942 12901155 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386689
chr19 12900945 12901050 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386690
chr19 12900950 12901266 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108386691
chr19 12900963 12901353 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386692
Genes associated with rs564608590[chr19:12900965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More