EnhancerDB
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  3. rs564621220[chr11:71781039]
Enhancers that have rs564621220[chr11:71781039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 71776425 71786832 enh14059
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Adrenal Breast Pancreas (Panc1) Uterus Stomach
Transcript factors that have rs564621220[chr11:71781039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 71779963 71781247 ZNF143 GTRD no Epithelial (MCF-7) 107987980
chr11 71780282 71781258 ZNF143 GTRD no Epithelial (MCF-7) 107987981
chr11 71780451 71781280 ZNF143 GTRD no Epithelial (MCF-7) 107987986
chr11 71781033 71781052 RFX2 JASPAR yes 39663916
chr11 71781034 71781039 GATA2 JASPAR yes 39663917
Genes associated with rs564621220[chr11:71781039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More