EnhancerDB
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  3. rs564726604[chr17:77957860]
Enhancers that have rs564726604[chr17:77957860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77955405 77983735 enh17427
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Blood (T-cell) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs564726604[chr17:77957860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77957142 77960582 ZNF274 GTRD no Liver (HepG2) 21796779
chr17 77957142 77960582 ZNF274 GTRD no Liver (HepG2) 108305610
chr17 77957241 77959833 ZNF274 GTRD no Blood (GM12878) 108305611
chr17 77957354 77960315 ZNF274 GTRD no Liver (HepG2) 21796780
chr17 77957354 77960315 ZNF274 GTRD no Liver (HepG2) 108305612
chr17 77957484 77960650 ZNF274 GTRD no Liver (HepG2) 21796781
chr17 77957484 77960650 ZNF274 GTRD no Liver (HepG2) 108305613
chr17 77957492 77960020 TCF7L2 GTRD no Colon (HCT116) 21796782
chr17 77957492 77960020 TCF7L2 GTRD no Colon (HCT116) 108305614
chr17 77957534 77959901 TCF7L2 GTRD no Colon (HCT116) 21796783
chr17 77957534 77959901 TCF7L2 GTRD no Colon (HCT116) 108305615
chr17 77957589 77959997 TCF7L2 GTRD no Colon (HCT116) 21796784
chr17 77957589 77959997 TCF7L2 GTRD no Colon (HCT116) 108305616
chr17 77957674 77960252 TCF7L2 GTRD no Colon (HCT116) 21796785
chr17 77957674 77960252 TCF7L2 GTRD no Colon (HCT116) 108305617
chr17 77957729 77959894 TCF7L2 GTRD no Colon (HCT116) 21796786
chr17 77957729 77959894 TCF7L2 GTRD no Colon (HCT116) 108305618
chr17 77957735 77960509 ZNF274 GTRD no Bone Marrow (K562) 108305619
chr17 77957738 77959840 ZNF274 GTRD no Liver (HepG2) 21796787
chr17 77957738 77959840 ZNF274 GTRD no Liver (HepG2) 108305620
chr17 77957739 77960281 ZNF274 GTRD no Bone Marrow (K562) 108305621
chr17 77957745 77959906 ZNF143 GTRD no Epithelial (MCF-7) 108305622
chr17 77957748 77959942 TCF7L2 GTRD no Colon (HCT116) 21796788
chr17 77957748 77959942 TCF7L2 GTRD no Colon (HCT116) 108305623
chr17 77957776 77959927 ZNF274 GTRD no Liver (HepG2) 21796789
chr17 77957776 77959927 ZNF274 GTRD no Liver (HepG2) 108305624
chr17 77957779 77959990 TCF7L2 GTRD no Colon (HCT116) 21796790
chr17 77957779 77959990 TCF7L2 GTRD no Colon (HCT116) 108305625
chr17 77957801 77960074 ZNF274 GTRD no Bone Marrow (K562) 108305626
chr17 77957802 77959843 ZNF274 GTRD no Bone Marrow (K562) 108305627
chr17 77957821 77960036 ZNF274 GTRD no Bone Marrow (K562) 108305628
chr17 77957848 77959901 TCF7L2 GTRD no Colon (HCT116) 21796791
chr17 77957848 77959901 TCF7L2 GTRD no Colon (HCT116) 108305629
chr17 77957851 77957872 ZNF263 JASPAR yes 56234114
chr17 77957853 77957864 YY2 JASPAR yes 56234115
chr17 77957854 77957860 YY1 JASPAR yes 56234116
chr17 77957854 77957875 ZNF263 JASPAR yes 56234117
chr17 77957854 77959901 TCF7L2 GTRD no Colon (HCT116) 21796792
chr17 77957854 77959901 TCF7L2 GTRD no Colon (HCT116) 108305630
chr17 77957857 77957862 SP1 TRANSFAC yes 56234118
chr17 77957857 77957863 SP1 TRANSFAC yes 56234119
chr17 77957858 77957878 RREB1 JASPAR yes 56234120
chr17 77957859 77957873 GLIS2 JASPAR yes 56234121
chr17 77957859 77957874 NR2C2 JASPAR yes 56234122
chr17 77957859 77957879 RREB1 JASPAR yes 56234123
Genes associated with rs564726604[chr17:77957860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More