EnhancerDB
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  3. rs564825355[chr1:12647161]
Enhancers that have rs564825355[chr1:12647161]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12643625 12676355 enh11516
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs564825355[chr1:12647161]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12647149 12647163 RXRB JASPAR yes 26835699
chr1 12647149 12647163 RXRG JASPAR yes 26835700
chr1 12647155 12647176 IRF1 JASPAR yes 26835701
chr1 12647157 12647172 PRDM1 JASPAR yes 26835702
chr1 12647157 12647172 STAT2 JASPAR yes 26835703
chr1 12647158 12647179 IRF1 JASPAR yes 26835704
chr1 12647159 12647180 IRF1 JASPAR yes 26835705
chr1 12647160 12647175 FOXP1 JASPAR yes 26835706
chr1 12647160 12647181 IRF1 JASPAR yes 26835707
chr1 12647161 12647176 FOXP1 JASPAR yes 26835708
Genes associated with rs564825355[chr1:12647161], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More