EnhancerDB
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  3. rs564827790[chr12:117046681]
Enhancers that have rs564827790[chr12:117046681]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117016285 117050187 enh15030
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs564827790[chr12:117046681]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117044794 117046733 ZNF274 GTRD no Bone Marrow (K562) 21577761
chr12 117044915 117046932 TCF7L2 GTRD no Colon (HCT116) 21577766
chr12 117044964 117047152 ZNF274 GTRD no Bone Marrow (K562) 21577770
chr12 117045568 117047402 ZNF143 GTRD no Epithelial (MCF-7) 21577781
chr12 117045642 117046781 ZNF274 GTRD no Bone Marrow (K562) 21577782
chr12 117045724 117046731 ZBTB33 GTRD no Lung (A549) 21577784
chr12 117045783 117046757 ZNF274 GTRD no Bone Marrow (K562) 21577785
chr12 117045864 117046933 TCF7L2 GTRD no Colon (HCT116) 21577790
chr12 117046033 117047104 TCF7L2 GTRD no Colon (HCT116) 21577801
chr12 117046177 117046938 TCF7L2 GTRD no Colon (HCT116) 21577804
chr12 117046330 117047401 ZNF143 GTRD no Epithelial (MCF-7) 21577805
chr12 117046355 117046699 ZNF274 GTRD no Bone Marrow (K562) 21577806
chr12 117046476 117046886 TCF7L2 GTRD no Colon (HCT116) 21577807
chr12 117046676 117046691 RUNX2 JASPAR yes 124014841
chr12 117046678 117046690 FOXI1 JASPAR yes 124014842
Genes associated with rs564827790[chr12:117046681], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More