EnhancerDB
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  3. rs564879445[chr1:43943393]
Enhancers that have rs564879445[chr1:43943393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43924725 43950195 enh11811
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Stomach
Transcript factors that have rs564879445[chr1:43943393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43943375 43943393 IRF2 JASPAR yes 28498664
chr1 43943376 43943397 IRF1 JASPAR yes 28498665
chr1 43943381 43943402 IRF1 JASPAR yes 28498667
chr1 43943382 43943397 FOXP1 JASPAR yes 28498669
chr1 43943382 43943397 MEF2C JASPAR yes 28498670
chr1 43943382 43943403 IRF1 JASPAR yes 28498671
chr1 43943383 43943394 FOXP2 JASPAR yes 28498672
chr1 43943383 43943395 FOXC2 JASPAR yes 28498673
chr1 43943383 43943398 STAT2 JASPAR yes 28498674
chr1 43943384 43943399 FOXP1 JASPAR yes 28498675
chr1 43943387 43943402 MEF2A JASPAR yes 28498676
chr1 43943388 43943403 MEF2C JASPAR yes 28498677
chr1 43943391 43943395 YY1 TRANSFAC yes 28498678
Genes associated with rs564879445[chr1:43943393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More