EnhancerDB
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  3. rs564888073[chr1:203559357]
Enhancers that have rs564888073[chr1:203559357]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203556465 203587575 enh12561
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564888073[chr1:203559357]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203555242 203560078 ZNF274 GTRD no Cervix (HeLa-S3) 21369557
chr1 203556791 203559930 ZNF274 GTRD no Cervix (HeLa-S3) 21369562
chr1 203557000 203559569 ZNF274 GTRD no Cervix (HeLa-S3) 21369563
chr1 203557233 203559928 ZNF274 GTRD no Cervix (HeLa-S3) 21369565
chr1 203557764 203559694 ZNF274 GTRD no Cervix (HeLa-S3) 21369570
chr1 203558005 203560070 ZNF274 GTRD no Cervix (HeLa-S3) 21369577
chr1 203559350 203559361 FOXC1 JASPAR yes 34643423
Genes associated with rs564888073[chr1:203559357], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More