EnhancerDB
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  3. rs564905771[chr19:13178928]
Enhancers that have rs564905771[chr19:13178928]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs564905771[chr19:13178928]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13178913 13178934 IRF1 JASPAR yes 112507534
chr19 13178918 13178933 FOXP1 JASPAR yes 112507535
chr19 13178918 13178939 IRF1 JASPAR yes 112507536
chr19 13178919 13178940 IRF1 JASPAR yes 112507537
chr19 13178920 13178932 FOXC2 JASPAR yes 112507538
chr19 13178920 13178940 RREB1 JASPAR yes 112507539
chr19 13178921 13178932 FOXP2 JASPAR yes 112507540
chr19 13178923 13178935 IRF1 JASPAR yes 112507541
chr19 13178923 13178938 STAT2 JASPAR yes 112507542
chr19 13178924 13178939 FOXP1 JASPAR yes 112507543
chr19 13178924 13178945 IRF1 JASPAR yes 112507544
chr19 13178925 13178946 IRF1 JASPAR yes 112507545
chr19 13178926 13178946 RREB1 JASPAR yes 112507546
chr19 13178927 13178941 IRF7 JASPAR yes 112507547
Genes associated with rs564905771[chr19:13178928], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More