EnhancerDB
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  3. rs564912887[chr15:70048536]
Enhancers that have rs564912887[chr15:70048536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 70045752 70060475 enh16279
Skin (Keratinocyte) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs564912887[chr15:70048536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 70048130 70048566 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21664791
chr15 70048130 70048566 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108152001
chr15 70048142 70048757 TCF7L2 GTRD no Colon (HCT116) 21664792
chr15 70048142 70048757 TCF7L2 GTRD no Colon (HCT116) 108152002
chr15 70048261 70048573 TCF7L2 GTRD no Colon (HCT116) 21664793
chr15 70048261 70048573 TCF7L2 GTRD no Colon (HCT116) 108152003
chr15 70048526 70048536 NEUROG2 JASPAR yes 24375992
chr15 70048536 70048551 SCRT1 JASPAR yes 24375993
Genes associated with rs564912887[chr15:70048536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More