EnhancerDB
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  3. rs564954406[chr11:12100060]
Enhancers that have rs564954406[chr11:12100060]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12093525 12104015 enh43492
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Esophagus Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Stomach
Transcript factors that have rs564954406[chr11:12100060]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12100045 12100060 FOXA1 JASPAR yes 37418168
chr11 12100049 12100063 POU4F1 JASPAR yes 37418173
chr11 12100050 12100061 PHOX2A JASPAR yes 37418174
chr11 12100050 12100061 PROP1 JASPAR yes 37418175
chr11 12100052 12100066 POU4F1 JASPAR yes 37418176
chr11 12100053 12100066 DUXA JASPAR yes 37418177
chr11 12100054 12100065 DUX4 JASPAR yes 37418178
chr11 12100054 12100065 PHOX2A JASPAR yes 37418179
chr11 12100054 12100065 PROP1 JASPAR yes 37418180
chr11 12100054 12100070 POU4F2 JASPAR yes 37418181
chr11 12100054 12100070 POU4F3 JASPAR yes 37418182
chr11 12100055 12100065 PAX3 JASPAR yes 37418183
chr11 12100055 12100065 PAX7 JASPAR yes 37418184
chr11 12100056 12100070 POU4F1 JASPAR yes 37418185
chr11 12100056 12100071 HNF1A JASPAR yes 37418186
chr11 12100057 12100067 GSX1 JASPAR yes 37418187
chr11 12100057 12100067 GSX2 JASPAR yes 37418188
chr11 12100057 12100067 LHX2 JASPAR yes 37418189
chr11 12100057 12100067 LHX6 JASPAR yes 37418190
chr11 12100057 12100067 MNX1 JASPAR yes 37418191
chr11 12100057 12100067 NOTO JASPAR yes 37418192
chr11 12100057 12100067 POU6F1 JASPAR yes 37418193
chr11 12100057 12100067 RAX JASPAR yes 37418194
chr11 12100058 12100066 ISX JASPAR yes 37418195
chr11 12100058 12100066 LMX1A JASPAR yes 37418196
chr11 12100058 12100066 LMX1B JASPAR yes 37418197
chr11 12100058 12100066 NKX6-1 JASPAR yes 37418198
chr11 12100058 12100066 NKX6-2 JASPAR yes 37418199
chr11 12100058 12100066 PRRX1 JASPAR yes 37418200
chr11 12100058 12100066 RAX2 JASPAR yes 37418201
chr11 12100058 12100066 SHOX JASPAR yes 37418202
chr11 12100058 12100066 UNCX JASPAR yes 37418203
chr11 12100058 12100066 VAX1 JASPAR yes 37418204
chr11 12100058 12100069 PHOX2A JASPAR yes 37418205
chr11 12100058 12100069 PROP1 JASPAR yes 37418206
chr11 12100059 12100069 PAX3 JASPAR yes 37418207
chr11 12100059 12100069 PAX7 JASPAR yes 37418208
chr11 12100059 12100070 PHOX2A JASPAR yes 37418209
chr11 12100059 12100070 PROP1 JASPAR yes 37418210
Genes associated with rs564954406[chr11:12100060], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More