EnhancerDB
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  3. rs564954704[chr1:230224177]
Enhancers that have rs564954704[chr1:230224177]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs564954704[chr1:230224177]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230224161 230224182 IRF1 JASPAR yes 36020247
chr1 230224176 230224186 PAX7 JASPAR yes 36020248
chr1 230224176 230224187 PROP1 JASPAR yes 36020249
Genes associated with rs564954704[chr1:230224177], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More