EnhancerDB
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  3. rs565104822[chr5:171612987]
Enhancers that have rs565104822[chr5:171612987]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs565104822[chr5:171612987]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171612968 171612987 RFX2 JASPAR yes 67773022
chr5 171612975 171612989 STAT1 JASPAR yes 67773024
chr5 171612975 171612990 STAT2 JASPAR yes 67773025
chr5 171612987 171613001 TLX1 JASPAR yes 67773026
Genes associated with rs565104822[chr5:171612987], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More