EnhancerDB
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  3. rs565195849[chr17:78847462]
Enhancers that have rs565195849[chr17:78847462]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs565195849[chr17:78847462]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78847167 78847767 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797458
chr17 78847167 78847767 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308015
chr17 78847235 78847579 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797459
chr17 78847235 78847579 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308016
chr17 78847273 78847597 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797460
chr17 78847273 78847597 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308017
chr17 78847310 78847560 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797461
chr17 78847310 78847560 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308018
chr17 78847340 78847860 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797462
chr17 78847340 78847860 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308019
chr17 78847395 78847719 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797463
chr17 78847395 78847719 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308020
chr17 78847405 78847749 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797464
chr17 78847405 78847749 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308021
chr17 78847412 78847822 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108308022
chr17 78847413 78847743 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797465
chr17 78847413 78847743 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308023
chr17 78847441 78847765 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797466
chr17 78847441 78847765 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308024
chr17 78847456 78847466 RUNX3 JASPAR yes 56288329
chr17 78847462 78847471 SRY JASPAR yes 21316254
chr17 78847462 78847471 SRY JASPAR yes 56288330
Genes associated with rs565195849[chr17:78847462], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More