EnhancerDB
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  3. rs565276228[chr6:41674261]
Enhancers that have rs565276228[chr6:41674261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs565276228[chr6:41674261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540185
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540186
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540187
chr6 41674242 41674262 RREB1 JASPAR yes 101667211
chr6 41674243 41674263 RREB1 JASPAR yes 101667212
chr6 41674247 41674268 ZNF263 JASPAR yes 101667216
chr6 41674251 41674261 GCM2 JASPAR yes 101667219
Genes associated with rs565276228[chr6:41674261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More