EnhancerDB
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  3. rs565378003[chr1:8161207]
Enhancers that have rs565378003[chr1:8161207]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8147625 8162861 enh11461
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs565378003[chr1:8161207]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8161193 8161208 MEF2C JASPAR yes 26512711
chr1 8161193 8161214 IRF1 JASPAR yes 26512712
chr1 8161197 8161211 ONECUT2 JASPAR yes 26512714
chr1 8161197 8161211 ONECUT3 JASPAR yes 26512715
chr1 8161202 8161213 PROP1 JASPAR yes 26512716
chr1 8161204 8161214 HOXA13 JASPAR yes 26512717
chr1 8161204 8161214 HOXD13 JASPAR yes 26512718
chr1 8161204 8161215 HOXA10 JASPAR yes 26512719
chr1 8161205 8161214 CDX1 JASPAR yes 26512720
chr1 8161205 8161216 CDX2 JASPAR yes 26512721
chr1 8161206 8161218 MEF2A JASPAR yes 26512722
chr1 8161206 8161218 MEF2B JASPAR yes 26512723
chr1 8161206 8161218 MEF2D JASPAR yes 26512724
Genes associated with rs565378003[chr1:8161207], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More