EnhancerDB
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  3. rs565420807[chr17:78806370]
Enhancers that have rs565420807[chr17:78806370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78797749 78810595 enh4639
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs565420807[chr17:78806370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78805346 78807625 ZNF274 GTRD no Blood (GM12878) 108307666
chr17 78805858 78807605 TCF7L2 GTRD no Colon (HCT116) 21797373
chr17 78805858 78807605 TCF7L2 GTRD no Colon (HCT116) 108307667
chr17 78806206 78807528 POLR2A UCSC Txn Factor no Conserved 108307668
chr17 78806348 78806894 ZNF274 GTRD no Bone Marrow (K562) 21797374
chr17 78806348 78806894 ZNF274 GTRD no Bone Marrow (K562) 108307669
chr17 78806348 78806994 ZNF274 GTRD no Cervix (HeLa-S3) 21797375
chr17 78806348 78806994 ZNF274 GTRD no Cervix (HeLa-S3) 108307670
chr17 78806353 78806965 ZNF274 GTRD no Bone Marrow (K562) 21797376
chr17 78806353 78806965 ZNF274 GTRD no Bone Marrow (K562) 108307671
chr17 78806364 78806383 REST JASPAR yes 56284630
Genes associated with rs565420807[chr17:78806370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More