EnhancerDB
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  3. rs565522859[chr1:220477128]
Enhancers that have rs565522859[chr1:220477128]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220466225 220478595 enh12679
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs565522859[chr1:220477128]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220477123 220477134 PROP1 JASPAR yes 35483313
chr1 220477125 220477135 HOXA13 JASPAR yes 35483314
chr1 220477125 220477135 HOXD13 JASPAR yes 35483315
chr1 220477125 220477136 HOXA10 JASPAR yes 35483316
chr1 220477126 220477135 CDX1 JASPAR yes 35483317
chr1 220477126 220477137 CDX2 JASPAR yes 35483318
chr1 220477127 220477143 POU4F2 JASPAR yes 35483319
chr1 220477127 220477143 POU4F3 JASPAR yes 35483320
Genes associated with rs565522859[chr1:220477128], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More