EnhancerDB
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  3. rs565624143[chr1:12198144]
Enhancers that have rs565624143[chr1:12198144]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12196945 12220680 enh11507
Prostate (PC-3) Large Intestine Ovary Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs565624143[chr1:12198144]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12198138 12198149 TFAP2A JASPAR yes 26802205
chr1 12198138 12198149 TFAP2B JASPAR yes 26802206
chr1 12198138 12198149 TFAP2C JASPAR yes 26802207
chr1 12198139 12198148 TFAP2A JASPAR yes 26802208
chr1 12198144 12198148 LFA1 TRANSFAC yes 26802209
Genes associated with rs565624143[chr1:12198144], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More