EnhancerDB
  1. Home
  2. SNP
  3. rs565887687[chr1:8693220]
Enhancers that have rs565887687[chr1:8693220]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8683665 8706215 enh26519
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Ovary Lung (PC-9) Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs565887687[chr1:8693220]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8693207 8693220 SMAD2 JASPAR yes 26579635
chr1 8693212 8693220 MGA JASPAR yes 26579636
chr1 8693212 8693220 TBX15 JASPAR yes 26579637
chr1 8693212 8693220 TBX1 JASPAR yes 26579638
chr1 8693212 8693220 TBX4 JASPAR yes 26579639
chr1 8693212 8693220 TBX5 JASPAR yes 26579640
chr1 8693219 8693223 TEAD2 TRANSFAC yes 26579641
chr1 8693220 8693228 RHOXF1 JASPAR yes 26579642
Genes associated with rs565887687[chr1:8693220], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More