EnhancerDB
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  3. rs565908412[chr19:13178586]
Enhancers that have rs565908412[chr19:13178586]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs565908412[chr19:13178586]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13178574 13178590 RFX2 JASPAR yes 112507485
chr19 13178574 13178590 RFX3 JASPAR yes 112507486
chr19 13178574 13178590 RFX4 JASPAR yes 112507487
chr19 13178586 13178600 SPIC JASPAR yes 112507489
Genes associated with rs565908412[chr19:13178586], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More