EnhancerDB
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  3. rs565940831[chr1:9621678]
Enhancers that have rs565940831[chr1:9621678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9595905 9627275 enh49
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs565940831[chr1:9621678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9621673 9621692 RFX2 JASPAR yes 26662366
chr1 9621677 9621693 RFX2 JASPAR yes 26662367
chr1 9621677 9621693 RFX3 JASPAR yes 26662368
chr1 9621677 9621693 RFX4 JASPAR yes 26662369
chr1 9621677 9621693 RFX5 JASPAR yes 26662370
chr1 9621678 9621697 RFX2 JASPAR yes 26662371
Genes associated with rs565940831[chr1:9621678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More