EnhancerDB
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  3. rs566004171[chr1:41572518]
Enhancers that have rs566004171[chr1:41572518]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41570885 41578942 enh11781
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Esophagus Astrocyte Liver Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs566004171[chr1:41572518]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41572514 41572522 TBX5 JASPAR yes 28363387
chr1 41572514 41572523 ZEB1 JASPAR yes 28363388
chr1 41572514 41572527 ZBTB18 JASPAR yes 28363389
chr1 41572515 41572525 ID4 JASPAR yes 28363390
chr1 41572515 41572525 TCF3 JASPAR yes 28363391
chr1 41572515 41572525 TCF4 JASPAR yes 28363392
chr1 41572517 41572522 USF2 TRANSFAC yes 28363393
Genes associated with rs566004171[chr1:41572518], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More