EnhancerDB
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  3. rs566039514[chr2:204515058]
Enhancers that have rs566039514[chr2:204515058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204509065 204518372 enh34163
Brain (SK-N-MC) Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs566039514[chr2:204515058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204515046 204515067 IRF1 JASPAR yes 80250237
chr2 204515049 204515063 SPI1 JASPAR yes 80250238
chr2 204515050 204515071 IRF1 JASPAR yes 80250239
chr2 204515052 204515059 SPIB JASPAR yes 80250240
chr2 204515052 204515073 IRF1 JASPAR yes 80250241
chr2 204515053 204515074 IRF1 JASPAR yes 80250242
chr2 204515054 204515075 IRF1 JASPAR yes 80250243
chr2 204515055 204515070 FOXP1 JASPAR yes 80250244
chr2 204515055 204515076 IRF1 JASPAR yes 80250245
chr2 204515057 204515072 FOXP1 JASPAR yes 80250246
chr2 204515058 204515073 FOXP1 JASPAR yes 80250247
Genes associated with rs566039514[chr2:204515058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More