EnhancerDB
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  3. rs566140928[chr1:226316665]
Enhancers that have rs566140928[chr1:226316665]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226305145 226318791 enh953
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Heart
Transcript factors that have rs566140928[chr1:226316665]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226316655 226316669 GLIS2 JASPAR yes 35793892
chr1 226316658 226316668 MZF1 JASPAR yes 35793893
chr1 226316658 226316668 SP1 JASPAR yes 35793894
chr1 226316658 226316668 ZNF740 JASPAR yes 35793895
chr1 226316659 226316669 ZNF740 JASPAR yes 35793896
chr1 226316661 226316672 NFKB1 JASPAR yes 35793897
chr1 226316664 226316669 SP1 TRANSFAC yes 35793898
Genes associated with rs566140928[chr1:226316665], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More