EnhancerDB
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  3. rs566171639[chr1:26219171]
Enhancers that have rs566171639[chr1:26219171]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 26213205 26226323 enh11640
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus
Transcript factors that have rs566171639[chr1:26219171]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 26219152 26219172 RREB1 JASPAR yes 27612007
chr1 26219162 26219177 TFAP2A JASPAR yes 27612008
chr1 26219162 26219177 TFAP2C JASPAR yes 27612009
chr1 26219164 26219176 TFAP2A JASPAR yes 27612011
chr1 26219164 26219176 TFAP2B JASPAR yes 27612012
chr1 26219164 26219176 TFAP2C JASPAR yes 27612013
chr1 26219165 26219174 TFAP2A JASPAR yes 27612014
chr1 26219166 26219175 TFAP2A JASPAR yes 27612015
Genes associated with rs566171639[chr1:26219171], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More