EnhancerDB
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  3. rs566188393[chr1:9842493]
Enhancers that have rs566188393[chr1:9842493]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9840492 9854775 enh53
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs566188393[chr1:9842493]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9842487 9842495 FOXC1 JASPAR yes 26677583
chr1 9842489 9842496 NKX3-1 JASPAR yes 26677584
Genes associated with rs566188393[chr1:9842493], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More