EnhancerDB
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  3. rs566242720[chr12:125093555]
Enhancers that have rs566242720[chr12:125093555]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125086525 125100115 enh2675
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Colon (HCT116) Breast Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs566242720[chr12:125093555]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125091897 125093893 TCF7L2 GTRD no Colon (HCT116) 21581213
chr12 125092128 125093572 P63 GTRD no Skin (Keratinocyte) 21581215
chr12 125092429 125093981 ZNF143 GTRD no Epithelial (MCF-7) 21581222
chr12 125092433 125094235 ZNF143 GTRD no Epithelial (MCF-7) 21581223
chr12 125092436 125094201 ZNF143 GTRD no Epithelial (MCF-7) 21581224
chr12 125092447 125094084 ZNF143 GTRD no Epithelial (MCF-7) 21581226
chr12 125092454 125094201 ZNF143 GTRD no Epithelial (MCF-7) 21581227
chr12 125092690 125094243 ZNF143 GTRD no Epithelial (MCF-7) 21581233
chr12 125092746 125093945 ZNF143 GTRD no Epithelial (MCF-7) 21581235
chr12 125092800 125093969 ZNF143 GTRD no Epithelial (MCF-7) 21581236
chr12 125093017 125093583 ZNF274 GTRD no Bone Marrow (K562) 21581244
chr12 125093107 125094083 ZNF143 GTRD no Epithelial (MCF-7) 21581246
chr12 125093229 125093905 ZNF274 GTRD no Bone Marrow (K562) 21581247
chr12 125093312 125093860 ZNF143 GTRD no Epithelial (MCF-7) 21581248
chr12 125093424 125094181 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581249
chr12 125093451 125094075 ZNF274 GTRD no Bone Marrow (K562) 21581250
chr12 125093457 125093714 ZNF274 GTRD no Cervix (HeLa-S3) 21581251
chr12 125093466 125093725 ZNF274 GTRD no Cervix (HeLa-S3) 21581252
chr12 125093480 125093834 ZNF274 GTRD no Bone Marrow (K562) 21581253
chr12 125093486 125094156 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21581254
chr12 125093489 125093773 ZNF274 GTRD no Bone Marrow (K562) 21581255
chr12 125093524 125093716 ZNF274 GTRD no Bone Marrow (K562) 21581256
chr12 125093544 125093940 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581257
chr12 125093549 125093557 SP1 TRANSFAC yes 124398303
chr12 125093550 125093555 SP1 TRANSFAC yes 124398304
chr12 125093551 125093556 SP1 TRANSFAC yes 124398305
chr12 125093551 125093560 HIC2 JASPAR yes 124398306
chr12 125093551 125094081 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581258
chr12 125093553 125093923 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21581259
chr12 125093554 125093558 LFA1 TRANSFAC yes 124398307
chr12 125093554 125094124 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21581260
Genes associated with rs566242720[chr12:125093555], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More