EnhancerDB
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  3. rs566306[chr12:52221783]
Enhancers that have rs566306[chr12:52221783]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52218612 52224015 enh29576
Brain (SK-N-SH) Epithelial (MCF-7) Astrocyte Breast Neural Stem Cells (H9) Stomach
Transcript factors that have rs566306[chr12:52221783]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52220702 52222527 ZNF143 GTRD no Epithelial (MCF-7) 21545756
chr12 52220786 52222717 ZNF143 GTRD no Epithelial (MCF-7) 21545757
chr12 52221021 52221798 ZNF143 GTRD no Epithelial (MCF-7) 21545760
chr12 52221607 52222385 ZBTB33 GTRD no Brain (SK-N-SH) 21545762
chr12 52221660 52222378 ZBTB33 GTRD no Brain (SK-N-SH) 21545763
chr12 52221668 52222479 ZBTB33 GTRD no Brain (SK-N-SH) 21545764
chr12 52221676 52222515 ZBTB33 GTRD no Brain (SK-N-SH) 21545765
chr12 52221681 52222480 ZBTB33 GTRD no Brain (SK-N-SH) 21545766
chr12 52221712 52222629 ZNF143 GTRD no Epithelial (MCF-7) 21545767
chr12 52221717 52222577 ZNF143 GTRD no Epithelial (MCF-7) 21545768
chr12 52221724 52222034 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21545769
chr12 52221751 52222841 ZNF143 GTRD no Epithelial (MCF-7) 21545770
chr12 52221765 52222666 ZNF143 GTRD no Epithelial (MCF-7) 21545771
chr12 52221769 52222587 ZNF143 GTRD no Epithelial (MCF-7) 21545772
chr12 52221770 52222644 ZNF143 GTRD no Epithelial (MCF-7) 21545773
chr12 52221779 52221799 ESR1 JASPAR yes 120902376
chr12 52221780 52221784 TEAD2 TRANSFAC yes 120902377
chr12 52221781 52221801 PPARG JASPAR yes 120902378
chr12 52221783 52221801 ESR2 JASPAR yes 120902379
Genes associated with rs566306[chr12:52221783], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More