EnhancerDB
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  3. rs566351853[chr2:238804254]
Enhancers that have rs566351853[chr2:238804254]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238789822 238819991 enh19403
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 238803368 238807597 vista1021
VISTA
Transcript factors that have rs566351853[chr2:238804254]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238804251 238804266 ZIC3 JASPAR yes 68303626
chr2 238804251 238804266 ZIC4 JASPAR yes 68303627
chr2 238804251 238804266 ZIC3 JASPAR yes 82144077
chr2 238804251 238804266 ZIC4 JASPAR yes 82144078
chr2 238804252 238804266 GLIS2 JASPAR yes 68303628
chr2 238804252 238804266 ZIC1 JASPAR yes 68303629
chr2 238804252 238804266 GLIS2 JASPAR yes 82144079
chr2 238804252 238804266 ZIC1 JASPAR yes 82144080
Genes associated with rs566351853[chr2:238804254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More