EnhancerDB
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  3. rs566364177[chr1:212397660]
Enhancers that have rs566364177[chr1:212397660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212396705 212423635 enh12640
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs566364177[chr1:212397660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212397653 212397665 PKNOX1 JASPAR yes 35111517
chr1 212397660 212397675 RFX5 JASPAR yes 35111518
Genes associated with rs566364177[chr1:212397660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More