EnhancerDB
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  3. rs566409317[chr17:70422021]
Enhancers that have rs566409317[chr17:70422021]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 70421948 70422074 vista25812
VISTA
Transcript factors that have rs566409317[chr17:70422021]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70418498 70422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784993
chr17 70418498 70422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290126
chr17 70421527 70422930 AR GTRD no Prostate (PC-3) 21785114
chr17 70421527 70422930 AR GTRD no Prostate (PC-3) 108290127
chr17 70421780 70422164 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785115
chr17 70421780 70422164 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290128
chr17 70421780 70422218 RELA UCSC Txn Factor no Conserved 108290129
chr17 70421856 70422236 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785116
chr17 70421856 70422236 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290130
chr17 70421865 70422033 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785117
chr17 70421865 70422033 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290131
chr17 70421994 70422494 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785118
chr17 70421994 70422494 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290132
chr17 70422005 70422025 RREB1 JASPAR yes 21287718
chr17 70422005 70422025 RREB1 JASPAR yes 55786826
chr17 70422010 70422030 RREB1 JASPAR yes 21287719
chr17 70422010 70422030 RREB1 JASPAR yes 55786827
chr17 70422011 70422022 FOXH1 JASPAR yes 21287720
chr17 70422011 70422022 FOXH1 JASPAR yes 55786828
Genes associated with rs566409317[chr17:70422021], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More