EnhancerDB
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  3. rs566414900[chr1:3473187]
Enhancers that have rs566414900[chr1:3473187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3448190 3482098 enh11432
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs566414900[chr1:3473187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3473172 3473187 TFAP2A JASPAR yes 26295721
chr1 3473172 3473187 TFAP2C JASPAR yes 26295722
chr1 3473174 3473189 TFAP2C JASPAR yes 26295723
chr1 3473175 3473187 TFAP2B JASPAR yes 26295727
chr1 3473175 3473187 TFAP2C JASPAR yes 26295728
Genes associated with rs566414900[chr1:3473187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More