EnhancerDB
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  3. rs566496180[chr2:37785320]
Enhancers that have rs566496180[chr2:37785320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 37774853 37803415 enh5416
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus
Transcript factors that have rs566496180[chr2:37785320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 37785316 37785327 PHOX2A JASPAR yes 73060503
chr2 37785316 37785327 PROP1 JASPAR yes 73060504
chr2 37785317 37785321 YY1 TRANSFAC yes 73060505
chr2 37785319 37785329 ALX3 JASPAR yes 73060506
chr2 37785319 37785329 GSX1 JASPAR yes 73060507
chr2 37785319 37785329 GSX2 JASPAR yes 73060508
chr2 37785319 37785329 LHX6 JASPAR yes 73060509
chr2 37785319 37785329 MIXL1 JASPAR yes 73060510
chr2 37785319 37785329 MNX1 JASPAR yes 73060511
chr2 37785319 37785329 NOTO JASPAR yes 73060512
chr2 37785319 37785329 POU6F1 JASPAR yes 73060513
chr2 37785319 37785329 RAX JASPAR yes 73060514
chr2 37785319 37785334 HNF1A JASPAR yes 73060515
chr2 37785320 37785328 ISX JASPAR yes 73060516
chr2 37785320 37785328 LMX1A JASPAR yes 73060517
chr2 37785320 37785328 LMX1B JASPAR yes 73060518
chr2 37785320 37785328 NKX6-1 JASPAR yes 73060519
chr2 37785320 37785328 NKX6-2 JASPAR yes 73060520
chr2 37785320 37785328 PRRX1 JASPAR yes 73060521
chr2 37785320 37785328 RAX2 JASPAR yes 73060522
chr2 37785320 37785328 SHOX JASPAR yes 73060523
chr2 37785320 37785328 UNCX JASPAR yes 73060524
chr2 37785320 37785328 VAX1 JASPAR yes 73060525
chr2 37785320 37785331 PHOX2A JASPAR yes 73060526
chr2 37785320 37785331 PROP1 JASPAR yes 73060527
chr2 37785320 37785334 POU4F1 JASPAR yes 73060528
chr2 37785320 37785336 POU4F2 JASPAR yes 73060529
chr2 37785320 37785336 POU4F3 JASPAR yes 73060530
Genes associated with rs566496180[chr2:37785320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More