EnhancerDB
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  3. rs566546801[chr6:17015749]
Enhancers that have rs566546801[chr6:17015749]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17010705 17025095 enh38842
Prostate (PC-3) Brain (SK-N-MC) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 17015732 17016108 vista51183
VISTA
Transcript factors that have rs566546801[chr6:17015749]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17015493 17015749 RUNX3 UCSC Txn Factor no Conserved 108538926
chr6 17015641 17016021 NFYB UCSC Txn Factor no Conserved 108538927
chr6 17015728 17015749 IRF1 JASPAR yes 70327443
chr6 17015728 17015749 IRF1 JASPAR yes 100356715
chr6 17015733 17015754 IRF1 JASPAR yes 70327447
chr6 17015733 17015754 IRF1 JASPAR yes 100356719
chr6 17015734 17015749 FOXP1 JASPAR yes 70327448
chr6 17015734 17015749 FOXP1 JASPAR yes 100356720
chr6 17015734 17015755 IRF1 JASPAR yes 70327449
chr6 17015734 17015755 IRF1 JASPAR yes 100356721
chr6 17015735 17015750 FOXP1 JASPAR yes 70327450
chr6 17015735 17015750 FOXP1 JASPAR yes 100356722
chr6 17015737 17015752 FOXP1 JASPAR yes 70327451
chr6 17015737 17015752 FOXP1 JASPAR yes 100356723
chr6 17015738 17015753 STAT2 JASPAR yes 70327452
chr6 17015738 17015753 STAT2 JASPAR yes 100356724
chr6 17015739 17015754 FOXP1 JASPAR yes 70327453
chr6 17015739 17015754 FOXP1 JASPAR yes 100356725
chr6 17015742 17015753 FOXP2 JASPAR yes 70327454
chr6 17015742 17015753 FOXP2 JASPAR yes 100356726
chr6 17015746 17015752 HiNF-A TRANSFAC yes 70327455
chr6 17015746 17015752 HiNF-A TRANSFAC yes 100356727
Genes associated with rs566546801[chr6:17015749], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More