EnhancerDB
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  3. rs566580083[chr1:28569748]
Enhancers that have rs566580083[chr1:28569748]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28563689 28580455 enh185
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs566580083[chr1:28569748]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28569743 28569757 GATA2 JASPAR yes 27752971
chr1 28569745 28569751 GATA1 TRANSFAC yes 27752972
chr1 28569745 28569753 GATA5 JASPAR yes 27752973
chr1 28569746 28569767 IRF1 JASPAR yes 27752974
chr1 28569748 28569763 IRF9 JASPAR yes 27752975
Genes associated with rs566580083[chr1:28569748], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More