EnhancerDB
  1. Home
  2. SNP
  3. rs566600703[chr19:3390233]
Enhancers that have rs566600703[chr19:3390233]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566600703[chr19:3390233]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3387557 3390833 ZNF274 GTRD no Cervix (HeLa-S3) 21839181
chr19 3387557 3390833 ZNF274 GTRD no Cervix (HeLa-S3) 108366474
chr19 3390223 3390238 TFAP2A JASPAR yes 112127183
chr19 3390223 3390238 TFAP2C JASPAR yes 112127184
chr19 3390226 3390237 EBF1 JASPAR yes 112127186
chr19 3390226 3390238 TFAP2A JASPAR yes 112127187
chr19 3390226 3390238 TFAP2B JASPAR yes 112127188
chr19 3390226 3390238 TFAP2C JASPAR yes 112127189
chr19 3390228 3390237 TFAP2A JASPAR yes 112127190
Genes associated with rs566600703[chr19:3390233], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More