EnhancerDB
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Enhancers that have rs566671534[chr1:244463223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 244459065 244471355 enh12849
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Placenta Thyroid Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs566671534[chr1:244463223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 244462623 244463279 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107888247
chr1 244462708 244463318 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107888264
chr1 244462860 244463230 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888315
chr1 244462923 244463359 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888319
chr1 244463209 244463228 PAX5 JASPAR yes 36725210
Genes associated with rs566671534[chr1:244463223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More